TGo4FitPeakFinder Class Reference

Output action To add some output to actions, TGo4FitterOutput action class should be used. More...

#include <TGo4FitPeakFinder.h>

Inheritance diagram for TGo4FitPeakFinder:

List of all members.


Public Member Functions
	TGo4FitPeakFinder ()
	Default constructor.
	TGo4FitPeakFinder (const char Name, const char DataName=0, Bool_t ClearModels=kFALSE, Int_t PolOrder=-1)
	Creates TGo4FitPeakFinder action with provided name and, , (optionally), DataName, clear models mode.
virtual	~TGo4FitPeakFinder ()
	Destroys TGo4FitterOutput object.
void	SetDataName (const char *name)
const char *	GetDataName ()
void	SetClearModels (Bool_t clear)
Bool_t	GetClearModels ()
void	SetupPolynomialBackground (Int_t PolynomOrder)
void	SetupForFirst (Double_t MaxAmplFactor, Double_t MinWidth, Double_t MaxWidth)
void	SetupForSecond (Double_t LineWidth)
void	SetupForThird (Double_t NoiseFactor, Double_t NoiseMinimum, Int_t ChannelSum)
virtual void	DoAction (TGo4FitterAbstract *Fitter)
virtual Bool_t	CanChangeFitter () const
void	SetUsePolynom (Bool_t use)
Bool_t	GetUsePolynom ()
void	SetPolynomOrder (Int_t order)
Int_t	GetPolynomOrder ()
void	SetPeakFinderType (Int_t typ)
Int_t	GetPeakFinderType ()
void	Set0MaxAmplFactor (Double_t factor)
Double_t	Get0MaxAmplFactor ()
void	Set0MinWidth (Double_t min)
Double_t	Get0MinWidth ()
void	Set0MaxWidth (Double_t max)
Double_t	Get0MaxWidth ()
void	Set1LineWidth (Double_t width)
Double_t	Get1LineWidth ()
void	Set2NoiseFactor (Double_t factor)
Double_t	Get2NoiseFactor ()
void	Set2NoiseMinimum (Double_t min)
Double_t	Get2NoiseMinimum ()
void	Set2ChannelSum (Int_t sum)
Int_t	Get2ChannelSum ()
virtual void	Print (Option_t *option) const
	Print information on standard output.
Private Member Functions
void	ROOTPeakFinder (TGo4Fitter fitter, TGo4FitData data, Int_t PolynomOrder, Double_t Sigma)
void	SergeyLinevPeakFinder (TGo4Fitter fitter, TGo4FitData data, Int_t PolOrder, Double_t AmplThreshold, Double_t MinWidth, Double_t MaxWidth)
	Perform simple peak finder algorithm.
void	HansEsselPeakFinder (TGo4Fitter fitter, TGo4FitData data, Int_t MaxNumPeaks=50, Int_t ChannelSum=1, Double_t NoiseFactor=2., Double_t NoiseMinimum=10., Int_t MinimasOrder=-1)
	Hans Essel (c) peak finder.
Static Private Member Functions
static void	DefinePolynom (Int_t size, Double_t bins, Double_t scales, TArrayD &Coef, Double_t weight=0, Double_t backgr=0, Char_t *use=0)
static void	DefinePolynomEx (Int_t size, Double_t bins, Double_t scales, Double_t weight, Double_t backgr, Int_t lbound, Int_t rbound, TArrayD &Coef)
static Double_t	CalcPolynom (const TArrayD &Coef, Double_t x)
Private Attributes
Int_t	fiPeakFinderType
TString	fxDataName
Bool_t	fbClearModels
Bool_t	fbUsePolynom
Int_t	fiPolynomOrder
Double_t	fd0MinWidth
Double_t	fd0MaxWidth
Double_t	fd0MaxAmplFactor
Double_t	fd1LineWidth
Double_t	fd2NoiseFactor
Double_t	fd2NoiseMinimum
Int_t	fi2ChannelSum

Detailed Description

Output action To add some output to actions, TGo4FitterOutput action class should be used.

In constructor output command and options (if required) should be specified. Also AddOuputAction() routine of fitter can be used. Now following commands are available: "Print". Possible options are: "*"- print all internal objects, "**" - print also objects in slots, "Pars" - print parameters values, "Ampls" - only amplitude parameters, "Results" - result values. "Draw". Draw of the fitter data and model objects. As option name of data object and its components should be sets up. For instance, "data1,Gauss1,Gauss2". If first character will be "#", Draw command creates new canvas for output.

Definition at line 32 of file TGo4FitPeakFinder.h.

Constructor & Destructor Documentation

TGo4FitPeakFinder::TGo4FitPeakFinder ( )

Default constructor.

Definition at line 30 of file TGo4FitPeakFinder.cxx.

TGo4FitPeakFinder::TGo4FitPeakFinder ( const char * Name,

const char * DataName = 0,

Bool_t ClearModels = kFALSE,

Int_t PolOrder = -1

)

Creates TGo4FitPeakFinder action with provided name and, , (optionally), DataName, clear models mode.

Definition at line 34 of file TGo4FitPeakFinder.cxx.

TGo4FitPeakFinder::~TGo4FitPeakFinder ( ) [virtual]

Destroys TGo4FitterOutput object.

Definition at line 43 of file TGo4FitPeakFinder.cxx.

Member Function Documentation

void TGo4FitPeakFinder::SetDataName ( const char * name ) [inline]

Definition at line 51 of file TGo4FitPeakFinder.h.
References fxDataName.

const char* TGo4FitPeakFinder::GetDataName ( ) [inline]

Definition at line 52 of file TGo4FitPeakFinder.h.
References fxDataName.
Referenced by DoAction().

void TGo4FitPeakFinder::SetClearModels ( Bool_t clear ) [inline]

Definition at line 53 of file TGo4FitPeakFinder.h.
References fbClearModels.

Bool_t TGo4FitPeakFinder::GetClearModels ( ) [inline]

Definition at line 54 of file TGo4FitPeakFinder.h.
References fbClearModels.
Referenced by DoAction().

void TGo4FitPeakFinder::SetupPolynomialBackground ( Int_t PolynomOrder )

Definition at line 46 of file TGo4FitPeakFinder.cxx.
References SetPolynomOrder(), and SetUsePolynom().

void TGo4FitPeakFinder::SetupForFirst ( Double_t MaxAmplFactor,

Double_t MinWidth,

Double_t MaxWidth

)

Definition at line 54 of file TGo4FitPeakFinder.cxx.
References Set0MaxAmplFactor(), Set0MaxWidth(), Set0MinWidth(), and SetPeakFinderType().
Referenced by Example11().

void TGo4FitPeakFinder::SetupForSecond ( Double_t LineWidth )

Definition at line 61 of file TGo4FitPeakFinder.cxx.
References Set1LineWidth(), and SetPeakFinderType().

void TGo4FitPeakFinder::SetupForThird ( Double_t NoiseFactor,

Double_t NoiseMinimum,

Int_t ChannelSum

)

Definition at line 66 of file TGo4FitPeakFinder.cxx.
References Set2ChannelSum(), Set2NoiseFactor(), Set2NoiseMinimum(), and SetPeakFinderType().

void TGo4FitPeakFinder::DoAction ( TGo4FitterAbstract * Fitter ) [virtual]

Implements TGo4FitterAction.
Definition at line 73 of file TGo4FitPeakFinder.cxx.
References TGo4Fitter::DeleteModelsAssosiatedTo(), TGo4Fitter::FindData(), Get0MaxAmplFactor(), Get0MaxWidth(), Get0MinWidth(), Get1LineWidth(), Get2ChannelSum(), Get2NoiseFactor(), Get2NoiseMinimum(), GetClearModels(), GetDataName(), GetPeakFinderType(), GetPolynomOrder(), GetUsePolynom(), HansEsselPeakFinder(), ROOTPeakFinder(), and SergeyLinevPeakFinder().

virtual Bool_t TGo4FitPeakFinder::CanChangeFitter ( ) const [inline, virtual]

Reimplemented from TGo4FitterAction.
Definition at line 67 of file TGo4FitPeakFinder.h.

void TGo4FitPeakFinder::SetUsePolynom ( Bool_t use ) [inline]

Definition at line 73 of file TGo4FitPeakFinder.h.
References fbUsePolynom.
Referenced by SetupPolynomialBackground().

Bool_t TGo4FitPeakFinder::GetUsePolynom ( ) [inline]

Definition at line 74 of file TGo4FitPeakFinder.h.
References fbUsePolynom.
Referenced by DoAction().

void TGo4FitPeakFinder::SetPolynomOrder ( Int_t order ) [inline]

Definition at line 75 of file TGo4FitPeakFinder.h.
References fiPolynomOrder.
Referenced by SetupPolynomialBackground().

Int_t TGo4FitPeakFinder::GetPolynomOrder ( ) [inline]

Definition at line 76 of file TGo4FitPeakFinder.h.
References fiPolynomOrder.
Referenced by DoAction().

void TGo4FitPeakFinder::SetPeakFinderType ( Int_t typ ) [inline]

Definition at line 78 of file TGo4FitPeakFinder.h.
References fiPeakFinderType.
Referenced by SetupForFirst(), SetupForSecond(), and SetupForThird().

Int_t TGo4FitPeakFinder::GetPeakFinderType ( ) [inline]

Definition at line 79 of file TGo4FitPeakFinder.h.
References fiPeakFinderType.
Referenced by DoAction().

void TGo4FitPeakFinder::Set0MaxAmplFactor ( Double_t factor ) [inline]

Definition at line 81 of file TGo4FitPeakFinder.h.
References fd0MaxAmplFactor.
Referenced by SetupForFirst().

Double_t TGo4FitPeakFinder::Get0MaxAmplFactor ( ) [inline]

Definition at line 82 of file TGo4FitPeakFinder.h.
References fd0MaxAmplFactor.
Referenced by DoAction().

void TGo4FitPeakFinder::Set0MinWidth ( Double_t min ) [inline]

Definition at line 83 of file TGo4FitPeakFinder.h.
References fd0MinWidth.
Referenced by SetupForFirst().

Double_t TGo4FitPeakFinder::Get0MinWidth ( ) [inline]

Definition at line 84 of file TGo4FitPeakFinder.h.
References fd0MinWidth.
Referenced by DoAction().

void TGo4FitPeakFinder::Set0MaxWidth ( Double_t max ) [inline]

Definition at line 85 of file TGo4FitPeakFinder.h.
References fd0MaxWidth.
Referenced by SetupForFirst().

Double_t TGo4FitPeakFinder::Get0MaxWidth ( ) [inline]

Definition at line 86 of file TGo4FitPeakFinder.h.
References fd0MaxWidth.
Referenced by DoAction().

void TGo4FitPeakFinder::Set1LineWidth ( Double_t width ) [inline]

Definition at line 88 of file TGo4FitPeakFinder.h.
References fd1LineWidth.
Referenced by SetupForSecond().

Double_t TGo4FitPeakFinder::Get1LineWidth ( ) [inline]

Definition at line 89 of file TGo4FitPeakFinder.h.
References fd1LineWidth.
Referenced by DoAction().

void TGo4FitPeakFinder::Set2NoiseFactor ( Double_t factor ) [inline]

Definition at line 91 of file TGo4FitPeakFinder.h.
References fd2NoiseFactor.
Referenced by SetupForThird().

Double_t TGo4FitPeakFinder::Get2NoiseFactor ( ) [inline]

Definition at line 92 of file TGo4FitPeakFinder.h.
References fd2NoiseFactor.
Referenced by DoAction().

void TGo4FitPeakFinder::Set2NoiseMinimum ( Double_t min ) [inline]

Definition at line 93 of file TGo4FitPeakFinder.h.
References fd2NoiseMinimum.
Referenced by SetupForThird().

Double_t TGo4FitPeakFinder::Get2NoiseMinimum ( ) [inline]

Definition at line 94 of file TGo4FitPeakFinder.h.
References fd2NoiseMinimum.
Referenced by DoAction().

void TGo4FitPeakFinder::Set2ChannelSum ( Int_t sum ) [inline]

Definition at line 95 of file TGo4FitPeakFinder.h.
References fi2ChannelSum.
Referenced by SetupForThird().

Int_t TGo4FitPeakFinder::Get2ChannelSum ( ) [inline]

Definition at line 96 of file TGo4FitPeakFinder.h.
References fi2ChannelSum.
Referenced by DoAction().

void TGo4FitPeakFinder::Print ( Option_t * option ) const [virtual]

Print information on standard output.

Reimplemented from TGo4FitNamed.
Definition at line 107 of file TGo4FitPeakFinder.cxx.
References TGo4FitNamed::Print().

void TGo4FitPeakFinder::ROOTPeakFinder ( TGo4Fitter * fitter,

TGo4FitData * data,

Int_t PolynomOrder,

Double_t Sigma

) [private]

Definition at line 151 of file TGo4FitPeakFinder.cxx.
References TGo4Fitter::AddGauss1(), TGo4Fitter::AddPolynomX(), TGo4FitDataIter::CountPoints(), TGo4Fitter::FindNextName(), TGo4FitComponent::GetAmplValue(), TGo4FitDataIter::HasWidths(), TGo4FitData::MakeIter(), TGo4FitDataIter::Next(), TGo4FitDataIter::Reset(), TGo4FitDataIter::Value(), TGo4FitDataIter::Widths(), and TGo4FitDataIter::x().
Referenced by DoAction().

void TGo4FitPeakFinder::SergeyLinevPeakFinder ( TGo4Fitter * fitter,

TGo4FitData * data,

Int_t PolOrder,

Double_t AmplThreshold,

Double_t MinWidth,

Double_t MaxWidth

) [private]

Perform simple peak finder algorithm.
Seeks for gaussians with amplitude more than given threshold (AmplThreshold introduced relative to maximum data value, from 0 to 1), with width in range between MinWidth and MaxWidth. Polynomial approximation can be applied for background appoximation(PolOrder>=0) or not used (PolOrder<0). Only selected by range conditions data part will be used by peak finder. Appropriate number of gaussians will be placed in list of models and associate with data.
Definition at line 275 of file TGo4FitPeakFinder.cxx.
References CalcPolynom(), TGo4FitDataIter::CountPoints(), DefinePolynom(), DefinePolynomEx(), FindValue(), TGo4FitComponent::GetAmplValue(), TGo4FitData::MakeIter(), TGo4FitDataIter::Next(), TGo4FitDataIter::Reset(), TGo4FitDataIter::StandardDeviation(), usage(), TGo4FitDataIter::Value(), and TGo4FitDataIter::x().
Referenced by DoAction().

void TGo4FitPeakFinder::HansEsselPeakFinder ( TGo4Fitter * fitter,

TGo4FitData * data,

Int_t MaxNumPeaks = 50,

Int_t ChannelSum = 1,

Double_t NoiseFactor = 2.,

Double_t NoiseMinimum = 10.,

Int_t MinimasOrder = -1

) [private]

Hans Essel (c) peak finder.

Definition at line 409 of file TGo4FitPeakFinder.cxx.
References TGo4Fitter::AddGauss1(), TGo4Fitter::AddPolynomX(), TGo4FitDataIter::CountPoints(), DefinePolynom(), TGo4Fitter::FindNextName(), TGo4FitComponent::GetAmplValue(), go4fit_find_peaks(), TGo4FitData::MakeIter(), TGo4FitDataIter::Next(), TGo4FitDataIter::Reset(), TYPE__DOUBLE, TGo4FitDataIter::Value(), and TGo4FitDataIter::x().
Referenced by DoAction().

void TGo4FitPeakFinder::DefinePolynom ( Int_t size,

Double_t * bins,

Double_t * scales,

TArrayD & Coef,

Double_t * weight = 0,

Double_t * backgr = 0,

Char_t * use = 0

) [static, private]

Definition at line 216 of file TGo4FitPeakFinder.cxx.
Referenced by DefinePolynomEx(), HansEsselPeakFinder(), and SergeyLinevPeakFinder().

void TGo4FitPeakFinder::DefinePolynomEx ( Int_t size,

Double_t * bins,

Double_t * scales,

Double_t * weight,

Double_t * backgr,

Int_t lbound,

Int_t rbound,

TArrayD & Coef

) [static, private]

Definition at line 256 of file TGo4FitPeakFinder.cxx.
References DefinePolynom().
Referenced by SergeyLinevPeakFinder().

Double_t TGo4FitPeakFinder::CalcPolynom ( const TArrayD & Coef,

Double_t x

) [static, private]

Definition at line 209 of file TGo4FitPeakFinder.cxx.
Referenced by SergeyLinevPeakFinder().

Member Data Documentation

Int_t TGo4FitPeakFinder::fiPeakFinderType [private]

Definition at line 154 of file TGo4FitPeakFinder.h.
Referenced by GetPeakFinderType(), and SetPeakFinderType().

TString TGo4FitPeakFinder::fxDataName [private]

Definition at line 156 of file TGo4FitPeakFinder.h.
Referenced by GetDataName(), and SetDataName().

Bool_t TGo4FitPeakFinder::fbClearModels [private]

Definition at line 158 of file TGo4FitPeakFinder.h.
Referenced by GetClearModels(), and SetClearModels().

Bool_t TGo4FitPeakFinder::fbUsePolynom [private]

Definition at line 160 of file TGo4FitPeakFinder.h.
Referenced by GetUsePolynom(), and SetUsePolynom().

Int_t TGo4FitPeakFinder::fiPolynomOrder [private]

Definition at line 161 of file TGo4FitPeakFinder.h.
Referenced by GetPolynomOrder(), and SetPolynomOrder().

Double_t TGo4FitPeakFinder::fd0MinWidth [private]

Definition at line 163 of file TGo4FitPeakFinder.h.
Referenced by Get0MinWidth(), and Set0MinWidth().

Double_t TGo4FitPeakFinder::fd0MaxWidth [private]

Definition at line 164 of file TGo4FitPeakFinder.h.
Referenced by Get0MaxWidth(), and Set0MaxWidth().

Double_t TGo4FitPeakFinder::fd0MaxAmplFactor [private]

Definition at line 165 of file TGo4FitPeakFinder.h.
Referenced by Get0MaxAmplFactor(), and Set0MaxAmplFactor().

Double_t TGo4FitPeakFinder::fd1LineWidth [private]

Definition at line 167 of file TGo4FitPeakFinder.h.
Referenced by Get1LineWidth(), and Set1LineWidth().

Double_t TGo4FitPeakFinder::fd2NoiseFactor [private]

Definition at line 169 of file TGo4FitPeakFinder.h.
Referenced by Get2NoiseFactor(), and Set2NoiseFactor().

Double_t TGo4FitPeakFinder::fd2NoiseMinimum [private]

Definition at line 170 of file TGo4FitPeakFinder.h.
Referenced by Get2NoiseMinimum(), and Set2NoiseMinimum().

Int_t TGo4FitPeakFinder::fi2ChannelSum [private]

Definition at line 171 of file TGo4FitPeakFinder.h.
Referenced by Get2ChannelSum(), and Set2ChannelSum().

The documentation for this class was generated from the following files:

Go4Fit/TGo4FitPeakFinder.h
Go4Fit/TGo4FitPeakFinder.cxx

Generated on Fri Nov 28 13:00:59 2008 for Go4-v3.04-1 by

1.4.2

TGo4FitPeakFinder Class Reference

Public Member Functions

Private Member Functions

Static Private Member Functions

Private Attributes

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation